Please use this identifier to cite or link to this item: http://hdl.handle.net/2440/99678
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Type: Journal article
Title: Applying polygenic risk scores to postpartum depression
Author: Byrne, E.
Carrillo-Roa, T.
Penninx, B.
Sallis, H.
Viktorin, A.
Chapman, B.
Henders, A.
Psychiatric Genomic Consortium Major Depressive Disorder Working Group
Pergadia, M.
Heath, A.
Madden, P.
Sullivan, P.
Boschloo, L.
van Grootheest, G.
McMahon, G.
Lawlor, D.
Landén, M.
Lichtenstein, P.
Magnusson, P.
Evans, D.
et al.
Citation: Archives of Women's Mental Health, 2014; 17(6):519-528
Publisher: Springer-Verlag
Issue Date: 2014
ISSN: 1434-1816
1435-1102
Statement of
Responsibility: 
Enda M. Byrne ...Psychiatric Genomic Consortium Major Depressive Disorder Working Group ... Debbie A. Lawlor ... et al.
Abstract: The etiology of major depressive disorder (MDD) is likely to be heterogeneous, but postpartum depression (PPD) is hypothesized to represent a more homogenous subset of MDD. We use genome-wide SNP data to explore this hypothesis. We assembled a total cohort of 1,420 self-report cases of PPD and 9,473 controls with genome-wide genotypes from Australia, The Netherlands, Sweden and the UK. We estimated the total variance attributable to genotyped variants. We used association results from the Psychiatric Genomics Consortia (PGC) of bipolar disorder (BPD) and MDD to create polygenic scores in PPD and related MDD data sets to estimate the genetic overlap between the disorders. We estimated that the percentage of variance on the liability scale explained by common genetic variants to be 0.22 with a standard error of 0.12, p = 0.02. The proportion of variance (R (2)) from a logistic regression of PPD case/control status in all four cohorts on a SNP profile score weighted by PGC-BPD association results was small (0.1 %) but significant (p = 0.004) indicating a genetic overlap between BPD and PPD. The results were highly significant in the Australian and Dutch cohorts (R (2) > 1.1 %, p < 0.008), where the majority of cases met criteria for MDD. The genetic overlap between BPD and MDD was not significant in larger Australian and Dutch MDD case/control cohorts after excluding PPD cases (R (2) = 0.06 %, p = 0.08), despite the larger MDD group affording more power. Our results suggest an empirical genetic evidence for a more important shared genetic etiology between BPD and PPD than between BPD and MDD.
Keywords: Depression; Postpartum; Bipolar
Description: Published online: 19 July 2014
Rights: © Springer-Verlag Wien 2014
RMID: 0030042724
DOI: 10.1007/s00737-014-0428-5
Grant ID: http://purl.org/au-research/grants/arc/FT0991360
http://purl.org/au-research/grants/nhmrc/613608
http://purl.org/au-research/grants/nhmrc/389892
http://purl.org/au-research/grants/nhmrc/496682
http://purl.org/au-research/grants/nhmrc/496688
http://purl.org/au-research/grants/nhmrc/496739
http://purl.org/au-research/grants/nhmrc/613672
Appears in Collections:Medicine publications

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